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--- inspect3d:tutorials:tutorial_files [2024/06/26 20:19] – created sgranger
+++ inspect3d:tutorials:tutorial_files [2024/07/12 13:26] (current) – removed sgranger
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-====== Tutorial_Files ======
-Inspect3D's tutorials use real data sets wherever possible in order to demonstrate realistic scenarios and avoid overly simplistic examples.
-==== Contents ====
-  * [[#Load_and_View_Data|1 Load and View Data]]
-  * [[#Clean_your_Data|2 Clean your Data]]
-  * [[#Perform_Principal_Component_Analysis|3 Perform Principal Component Analysis]]
-  * [[#Export_Results|4 Export Results]]
-  * [[#Healthy_Human_Walking|5 Healthy Human Walking]]
-  * [[#Treadmill_Walking_in_Healthy_Individuals|6 Treadmill Walking in Healthy Individuals]]
-  * [[#OpenBiomechanics_Project|7 OpenBiomechanics Project]]
-    * [[#Build_CMZs|7.1 Build CMZs]]
-    * [[#Refine_Queries_with_Metadata|7.2 Refine Queries with Metadata]]
-    * [[#Analysis_of_Baseball_Hitters_at_Different_Levels_of_Competition|7.3 Analysis of Baseball Hitters at Different Levels of Competition]]
-==== Load and View Data ====
-This tutorial can be completed with any [[Visual3D:Documentation:Definitions:File_Formats:CMZ_Format_|CMZ]] file. You can use a data set from a Visual3D Workshop at a recent ASB meeting. [[[https://www.has-motion.com/download/examples/V3D_Workshop.zip|V3D Workshop @ ASB]]].
-==== Clean your Data ====
-This tutorial uses overground walking data from four subjects. The subjects walked at three different speeds; slow, normal and fast. [[[https://www.has-motion.com/download/examples/FourSubjectsWalkingData.zip|Four Subjects Walking Data Set]]].
-==== Perform Principal Component Analysis ====
-This tutorial uses overground walking data from roughly 100 subjects divided into two conditions: normal control and osteoarthritis (moderate to severe). This data set can be found in the Demo folder of your Inspect3D installation.
-==== Export Results ====
-This tutorial uses the same overground walking data set as the [[#Clean_Data|Clean your Data]] tutorial. [[[https://www.has-motion.com/download/examples/FourSubjectsWalkingData.zip|Four Subjects Walking Data Set]]].
-It also uses predefined queries that have been saved in a .q3d file. [[[https://www.has-motion.com/download/examples/AnkleAngles.q3d|AnkleAngles.q3d]]].
-==== Healthy Human Walking ====
-This tutorial explores the publicly available data set described in [[https://www.nature.com/articles/s41597-022-01817-1|A biomechanics dataset of healthy human walking at various speeds, step lengths and step widths]] by Tim J. van der Zee, Emily M. Mundinger and Arthur D. Kuo.
-The data set is available through Figshare: [[[https://doi.org/10.6084/m9.figshare.c.5897423.v1|Data Set]]].
-Supporting files are provided to simplify some of the data processing steps: [[[https://www.has-motion.com/download/examples/Inspect3D/I3D_Tutorial_Healthy_Human_Walking.zip|Supporting Files]]].
-==== Treadmill Walking in Healthy Individuals ====
-This tutorial explores Fukuchi et al.'s "gold standard" public data set of marker-based motion capture to describe [[https://peerj.com/articles/4640/|healthy individuals walking overground and on a treadmill]].
-The dataset is available through Figshare: [[[https://figshare.com/articles/dataset/A_public_data_set_of_overground_and_treadmill_walking_kinematics_and_kinetics_of_healthy_individuals/5722711|Data Set]]].
-Supporting files are provided to simplify some of the tutorial's steps: [[[https://www.has-motion.com/download/examples/Inspect3D/I3D_Tutorial_Treadmill_Walking.zip|Supporting Files]]].
-==== OpenBiomechanics Project ====
-These data sets are part of a [[https://github.com/drivelineresearch/openbiomechanics|Driveline Baseball initiative]] to provide sports biomechanics data to the general public.
-=== Build CMZs ===
-This tutorial describes how to use Inspect3D's [[Inspect3D:Documentation:Knowledge_Discovery:Build_CMZs|Build CMZ]] feature to combine [[Visual3D:Documentation:C3D_Signal_Types:C3D_Format|c3d files]] and [[Inspect3D:Tutorials:Metadata|metadata]] into CMZ files.
-This tutorial uses the OpenBiomechanics Project's Pitching Data Set: [[[https://github.com/drivelineresearch/openbiomechanics/tree/main/baseball_pitching|Data Set]]]
-Supporting files are also provided: [[[https://www.has-motion.com/download/Katie/Driveline_CMotionFiles.zip|Supporting Files]]]
-=== Refine Queries with Metadata ===
-This tutorial describes how the metadata included in CMZ files can be used the refine queries.
-This tutorial uses the OpenBiomechanics Project's Hitting Data Set: [[[https://github.com/drivelineresearch/openbiomechanics/tree/main/baseball_hitting|Data Set]]]
-To avoid building CMZ files from scratch, a checkpoint folder is available: [[[https://www.has-motion.com/download/examples/Inspect3D/I3D_Tutorial_OBP_Refine_Queries.zip|Checkpoint]]]
-===  Analysis of Baseball Hitters at Different Levels of Competition ===
-In this tutorial you will observe Inspect3Ds ability to automate the processing of large-scale data sets, and how metadata can be used to help you refine queries, while exploring OpenBiomechanics publicly available sports biomechanics data.
-This tutorial uses the OpenBiomechanics Project's Hitting Data Set: [[[https://github.com/drivelineresearch/openbiomechanics/tree/main/baseball_hitting|Data Set]]]
-To avoid building CMZ files from scratch, a checkpoint folder is available: [[[https://www.has-motion.com/download/examples/Inspect3D/I3D_Tutorial_OBP_Analysis_of_Baseball_Hitters.zip|Checkpoint]]]